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  5. SymbC1.scaffold414.11

SymbC1.scaffold414.11 (414.11)


Aliases : 414.11

Description : Calreticulin/calnexin [Interproscan].


Gene families : OG_01_0000611 (OrthoFinder) Phylogenetic Tree(s): OG0000611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold414.11
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
EOD32124 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
Sro606_g174420.1 Contig3560.g27479 Inherit from NOG: P4Hc 0.01 OrthoFinder
XM_002504809.1 MICPUN_62386, 62386 Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498003.1_6956 KAA8498003 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001580 Calret/calnex 1891 2131
IPR001580 Calret/calnex 2133 2175
No external refs found!