SymbC1.scaffold404.6 (404.6)

Aliases : 404.6

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].

Gene families : OG_01_0002693 (OrthoFinder) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold404.6
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cz01g25210.t1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.02	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491814.1_4822	KAA8491814	T-complex protein 1 subunit theta	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Enrichment
CC	GO:0000786	nucleosome	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	Enrichment
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Enrichment
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Enrichment
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	6	301

External Links

No external refs found!