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  5. SymbC1.scaffold4039.1

SymbC1.scaffold4039.1 (4039.1)


Aliases : 4039.1

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000305 (OrthoFinder) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4039.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10192.1 10192.1 EF-hand domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1537.1 1537.1 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold1821.3 1821.3 EF-hand domain; Ion transport domain [Interproscan]. 0.1 OrthoFinder
SymbC1.scaffold2693.2 2693.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2758.5 2758.5 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2758.6 2758.6 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2852.1 2852.1 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
SymbC1.scaffold5363.2 5363.2 EF-hand domain pair; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold702.8 702.8 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 38 63
No external refs found!