SymbC1.scaffold4.852 (4.852)

Aliases : 4.852

Description : RND efflux pump, membrane fusion protein, barrel-sandwich domain; Acriflavin resistance protein; Phytanoyl-CoA dioxygenase [Interproscan].

Gene families : OG_01_0005517 (OrthoFinder) Phylogenetic Tree(s): OG0005517_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4.852

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold685.57	685.57	RND efflux pump, membrane fusion protein,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008775	Phytyl_CoA_dOase	1443	1599
IPR001036	Acrflvin-R	355	1400
IPR032317	HlyD_D23	53	269

External Links

No external refs found!

SymbC1.scaffold4.852 (4.852)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation