SymbC1.scaffold4.811 (4.811)

Aliases : 4.811

Description : NFACT protein RNA binding domain; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; Histidine kinase/HSP90-like ATPase; tRNA methyl transferase; Glutamine synthetase, beta-Grasp domain; Domain of unknown function DUF4124; Glutamine synthetase, catalytic domain [Interproscan].

Gene families : OG_01_0005044 (OrthoFinder) Phylogenetic Tree(s): OG0005044_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4.811
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold17178.4	17178.4	Glutamine synthetase, catalytic domain; Glutamine...	0.03	OrthoFinder
SymbC1.scaffold2.517	2.517	Membrane transport protein MMPL domain; Glutamine...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamate-ammonia ligase activity	IEA	Interproscan
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004803	transposase activity	IEP	Enrichment
BP	GO:0006313	transposition, DNA-mediated	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
BP	GO:0032196	transposition	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003594	HATPase_C	1281	1400
IPR003661	HisK_dim/P	1179	1238
IPR008146	Gln_synth_cat_dom	492	857
IPR025392	DUF4124	868	912
IPR008147	Gln_synt_b-grasp	404	484

External Links

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SymbC1.scaffold4.811 (4.811)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation