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  5. SymbC1.scaffold4.1682

SymbC1.scaffold4.1682 (4.1682)


Aliases : 4.1682

Description : Major facilitator superfamily; Phospholipase D-like domain; Cardiolipin synthase N-terminal [Interproscan].


Gene families : OG_01_0002084 (OrthoFinder) Phylogenetic Tree(s): OG0002084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1682
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.1436 4.1436 Major facilitator superfamily; Acyl-CoA... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025202 PLD-like_dom 992 1116
IPR025202 PLD-like_dom 808 920
IPR027379 CLS_N 693 734
IPR011701 MFS 39 386
No external refs found!