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  5. SymbC1.scaffold4.1042

SymbC1.scaffold4.1042 (4.1042)


Aliases : 4.1042

Description : DSBA-like thioredoxin domain; Cytochrome c-like domain; Endonuclease/exonuclease/phosphatase [Interproscan].


Gene families : OG_01_0013875 (OrthoFinder) Phylogenetic Tree(s): OG0013875_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1042
Cluster HCCA: Cluster_120


Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0015035 protein-disulfide reductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004068 aspartate 1-decarboxylase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006522 alanine metabolic process IEP Enrichment
BP GO:0006523 alanine biosynthetic process IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009078 pyruvate family amino acid metabolic process IEP Enrichment
BP GO:0009079 pyruvate family amino acid biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
CC GO:0009288 bacterial-type flagellum IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016662 oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0016999 antibiotic metabolic process IEP Enrichment
BP GO:0017000 antibiotic biosynthetic process IEP Enrichment
BP GO:0017144 drug metabolic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0030312 external encapsulating structure IEP Enrichment
CC GO:0031012 extracellular matrix IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032101 regulation of response to external stimulus IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0040012 regulation of locomotion IEP Enrichment
MF GO:0042279 nitrite reductase (cytochrome, ammonia-forming) activity IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050920 regulation of chemotaxis IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR009056 Cyt_c-like_dom 145 217
IPR001853 DSBA-like_thioredoxin_dom 325 432
IPR005135 Endo/exonuclease/phosphatase 507 735
No external refs found!