SymbC1.scaffold4.1011 (4.1011)

Aliases : 4.1011

Description : HlyD family secretion protein; Membrane fusion protein, biotin-lipoyl like domain; Alpha/beta hydrolase fold-1; Protein of unknown function DUF308, membrane; Outer membrane efflux protein; Amidohydrolase 3 [Interproscan].

Gene families : OG_01_0005046 (OrthoFinder) Phylogenetic Tree(s): OG0005046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4.1011
Cluster	HCCA: Cluster_120

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015562	efflux transmembrane transporter activity	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003714	transcription corepressor activity	IEP	Enrichment
MF	GO:0004127	cytidylate kinase activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0016989	sigma factor antagonist activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003423	OMP_efflux	2132	2238
IPR003423	OMP_efflux	2273	2455
IPR039562	MFP_biotin_lipoyl_2	1733	1777
IPR005325	DUF308_memb	323	391
IPR005325	DUF308_memb	378	446
IPR000073	AB_hydrolase_1	72	277
IPR013108	Amidohydro_3	541	1040

External Links

No external refs found!

SymbC1.scaffold4.1011 (4.1011)

Expression Profile

Co-expression Networks

Functional Annotation