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  5. SymbC1.scaffold4.1009

SymbC1.scaffold4.1009 (4.1009)


Aliases : 4.1009

Description : MotA/TolQ/ExbB proton channel; Phosphate-selective porin O/P; Domain of unknown function DUF11; OmpA-like domain; SD-repeat containing protein, B domain; Biopolymer transport protein ExbD/TolR [Interproscan].


Gene families : OG_01_0008869 (OrthoFinder) Phylogenetic Tree(s): OG0008869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1009
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.1349 4.1349 Peptidase M20, dimerisation domain; Biopolymer transport... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002898 MotA_ExbB_proton_chnl 73 196
IPR010870 Porin_O/P 4442 4693
IPR033764 Sdr_B 2043 2144
IPR001434 DUF11 1916 2003
IPR001434 DUF11 1760 1817
IPR001434 DUF11 1596 1699
IPR006665 OmpA-like 2727 2830
IPR006665 OmpA-like 2906 2993
IPR003400 ExbD 359 497
IPR003400 ExbD 210 334
No external refs found!