SymbC1.scaffold38781.1 (38781.1)


Aliases : 38781.1

Description : Protein of unknown function DUF1501 [Interproscan].


Gene families : OG_01_0000096 (OrthoFinder) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold38781.1

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1162 1.1162 Protein of unknown function DUF1501; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold1.1604 1.1604 Domain of unknown function DUF1588; Protein of unknown... 0.04 OrthoFinder
SymbC1.scaffold1.2037 1.2037 Protein of unknown function DUF1501; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold1.2384 1.2384 Protein of unknown function DUF1501; Transposase... 0.05 OrthoFinder
SymbC1.scaffold1.456 1.456 Protein of unknown function DUF1501; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold1.876 1.876 Domain of unknown function DUF1553;... 0.03 OrthoFinder
SymbC1.scaffold1.910 1.910 Domain of unknown function DUF1549; Protein of unknown... 0.02 OrthoFinder
SymbC1.scaffold1.927 1.927 Domain of unknown function DUF1549; Protein of unknown... 0.04 OrthoFinder
SymbC1.scaffold1.989 1.989 Domain of unknown function DUF1588; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold13180.3 13180.3 Domain of unknown function DUF1549; Protein of unknown... 0.03 OrthoFinder
SymbC1.scaffold15046.2 15046.2 Domain of unknown function DUF1553; RNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold16.366 16.366 Domain of unknown function DUF1549; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold18.235 18.235 Domain of unknown function DUF1549; Protein of unknown... 0.03 OrthoFinder
SymbC1.scaffold2.110 2.110 Protein of unknown function DUF1501 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold2.1175 2.1175 Alpha/beta hydrolase fold-3; Protein of unknown function... 0.05 OrthoFinder
SymbC1.scaffold2.1347 2.1347 Domain of unknown function DUF1553; Rad50/SbcC-type AAA... 0.04 OrthoFinder
SymbC1.scaffold22185.2 22185.2 Protein of unknown function DUF1501 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold27890.1 27890.1 Domain of unknown function DUF1553 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold29887.1 29887.1 Domain of unknown function DUF1553 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold30332.1 30332.1 Protein of unknown function DUF1501 [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold5.127 5.127 Protein of unknown function DUF1501; Domain of unknown... 0.02 OrthoFinder
SymbC1.scaffold9.414 9.414 Protein of unknown function DUF1501; Alpha/beta... 0.03 OrthoFinder
SymbC1.scaffold9.473 9.473 Protein of unknown function DUF1501; Domain of unknown... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0008614 pyridoxine metabolic process IEP Enrichment
BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR010869 DUF1501 158 297
No external refs found!