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  5. SymbC1.scaffold384.13

SymbC1.scaffold384.13 (384.13)


Aliases : 384.13

Description : Zinc finger, RING-CH-type; Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000606 (OrthoFinder) Phylogenetic Tree(s): OG0000606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold384.13
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.108 tig00000241_g20974.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
OT_14G00640.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
XM_003062219.1 MicpuC2_21083, 21083 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 15 123
IPR011016 Znf_RING-CH 191 242
No external refs found!