SymbC1.scaffold3641.3 (3641.3)


Aliases : 3641.3

Description : Hypothetical protein


Gene families : OG_01_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3641.3
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10380.1 10380.1 Integrase, catalytic core [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1152.4 1152.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold12679.1 12679.1 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold12679.2 12679.2 Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
SymbC1.scaffold1555.1 1555.1 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold166.9 166.9 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1771.4 1771.4 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1790.1 1790.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold2028.3 2028.3 Integrase, catalytic core [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2374.4 2374.4 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold329.2 329.2 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold3297.5 3297.5 Zinc finger, CCHC-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3612.1 3612.1 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold372.4 372.4 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold4098.6 4098.6 Zinc finger, CCHC-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4165.2 4165.2 Zinc finger, CCHC-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold5583.1 5583.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold6253.2 6253.2 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold692.1 692.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold7159.1 7159.1 Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
SymbC1.scaffold720.6 720.6 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold721.4 721.4 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8751.1 8751.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold8765.4 8765.4 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold9803.2 9803.2 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0008614 pyridoxine metabolic process IEP Enrichment
BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!