SymbC1.scaffold3376.1 (3376.1)

Aliases : 3376.1

Description : ABC-type glycine betaine transport system, substrate-binding domain [Interproscan].

Gene families : OG_01_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3376.1
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold2659.2	2659.2	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold2690.6	2690.6	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.04	OrthoFinder
SymbC1.scaffold4014.6	4014.6	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold629.10	629.10	ABC-type glycine betaine transport system,...	0.04	OrthoFinder
SymbC1.scaffold6307.2	6307.2	Hypothetical protein	0.05	OrthoFinder
SymbC1.scaffold6763.4	6763.4	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold739.3	739.3	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold9126.1	9126.1	Hypothetical protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0098533	ATPase dependent transmembrane transport complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
BP	GO:0007154	cell communication	IEP	Enrichment
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007210	ABC_Gly_betaine_transp_sub-bd	765	864

External Links

No external refs found!