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  5. SymbC1.scaffold3292.3

SymbC1.scaffold3292.3 (3292.3)


Aliases : 3292.3

Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3292.3
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000246.6 tig00000246_g21498.t1 No description available 0.01 OrthoFinder
Dusal.0066s00038.1 33195459 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.02 OrthoFinder
Dusal.0066s00039.1 33195429 DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.03 OrthoFinder
Dusal.0066s00040.1 33195455 ATPase, AAA-type, core; CbbX, AAA lid domain [Interproscan]. 0.02 OrthoFinder
EOD27386 No alias CbbX, AAA lid domain; ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
EOD39426 No alias CbbX, AAA lid domain; ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
PTI_01G00150.1 No alias Ankyrin repeat-containing domain; ATPase, AAA-type, core... 0.03 OrthoFinder
Sro1497_g277570.1 Contig4331.g32651 NFX1-type zinc finger-containing protein 1 0.01 OrthoFinder
TP03G09390.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
XM_002507300.1 MICPUN_51877, 51877 AAA ATPase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 981 1097
IPR003959 ATPase_AAA_core 1296 1423
No external refs found!