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  5. SymbC1.scaffold3285.4

SymbC1.scaffold3285.4 (3285.4)


Aliases : 3285.4

Description : Ammonium transporter AmtB-like domain [Interproscan].


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3285.4
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
EOD13611 No alias Putative ammonium transporter [Ensembl]. 0.02 OrthoFinder
EOD25835 No alias Putative ammonium transporter [Ensembl]. 0.01 OrthoFinder
EOD32919 No alias Ammonium transporter [Ensembl]. 0.04 OrthoFinder
Sro1521_g279450.1 Contig1605.g14549 Ammonium transporter 1 member 0.03 OrthoFinder
SymbC1.scaffold3067.2 3067.2 Ammonium transporter AmtB-like domain [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold7899.1 7899.1 Ammonium transporter AmtB-like domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 99 528
No external refs found!