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  5. SymbC1.scaffold3283.3

SymbC1.scaffold3283.3 (3283.3)


Aliases : 3283.3

Description : Ammonium transporter AmtB-like domain [Interproscan].


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3283.3
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020603.39 tig00020603_g11770.t1 Solute transport.channels.AMT family.ammonium... 0.02 OrthoFinder
Cre06.g293051 30778481 Solute transport.channels.AMT family.ammonium... 0.01 OrthoFinder
Dusal.1183s00002.1 33200831 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
Dusal.1338s00001.1 33196891 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
EOD36839 No alias Putative ammonium transporter [Ensembl]. 0.02 OrthoFinder
Sro565_g167610.1 Contig2465.g20186 Ammonium transporter 1 member 0.01 OrthoFinder
SymbC1.scaffold1816.3 1816.3 Ammonium transporter AmtB-like domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3067.2 3067.2 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold564.4 564.4 Ammonium transporter AmtB-like domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 2 296
No external refs found!