SymbC1.scaffold3227.3 (3227.3)


Aliases : 3227.3

Description : Protein of unknown function DUF1826; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000164 (OrthoFinder) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3227.3
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cz07g28260.t1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
EOD15136 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
EOD23338 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.01 OrthoFinder
Vocar.0062s0030.1 32892931 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR014955 DUF1826 72 229
IPR003495 CobW/HypB/UreG_dom 292 495
IPR011629 Cbl_biosynth_CobW-like_C 541 634
No external refs found!