SymbC1.scaffold32.89 (32.89)

Aliases : 32.89

Description : Methyl-accepting chemotaxis protein (MCP) signalling domain; CoA-binding; ABC-2 family transporter protein; Histidine kinase CheA-like, homodimeric domain; GNAT domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; HAMP domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; ATP-grasp domain; Succinyl-CoA synthetase-like, flavodoxin domain; Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; CheW-like domain; Double Cache domain 1; Protein of unknown function DUF901; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal [Interproscan].

Gene families : OG_01_0001853 (OrthoFinder) Phylogenetic Tree(s): OG0001853_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold32.89
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00021312.7	tig00021312_g20045.t1	No description available	0.01	OrthoFinder
SymbC1.scaffold2.1582	2.1582	CheW-like domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006935	chemotaxis	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008080	N-acetyltransferase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008984	protein-glutamate methylesterase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016410	N-acyltransferase activity	None	Extended
MF	GO:0016597	amino acid binding	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEA	Interproscan
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040011	locomotion	None	Extended
BP	GO:0042330	taxis	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0051723	protein methylesterase activity	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0006721	terpenoid metabolic process	IEP	Enrichment
BP	GO:0006873	cellular ion homeostasis	IEP	Enrichment
BP	GO:0006875	cellular metal ion homeostasis	IEP	Enrichment
BP	GO:0006879	cellular iron ion homeostasis	IEP	Enrichment
BP	GO:0007155	cell adhesion	IEP	Enrichment
BP	GO:0007160	cell-matrix adhesion	IEP	Enrichment
MF	GO:0008199	ferric iron binding	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
MF	GO:0008410	CoA-transferase activity	IEP	Enrichment
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Enrichment
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0016114	terpenoid biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Enrichment
BP	GO:0019725	cellular homeostasis	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
BP	GO:0030003	cellular cation homeostasis	IEP	Enrichment
CC	GO:0030312	external encapsulating structure	IEP	Enrichment
CC	GO:0031012	extracellular matrix	IEP	Enrichment
BP	GO:0031589	cell-substrate adhesion	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
BP	GO:0055065	metal ion homeostasis	IEP	Enrichment
BP	GO:0055072	iron ion homeostasis	IEP	Enrichment
BP	GO:0055076	transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0055082	cellular chemical homeostasis	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000673	Sig_transdc_resp-reg_Me-estase	3187	3366
IPR022642	CheR_C	3392	3576
IPR006132	Asp/Orn_carbamoyltranf_P-bd	587	741
IPR033479	dCache_1	2273	2615
IPR003781	CoA-bd	3602	3727
IPR006131	Asp_carbamoyltransf_Asp/Orn-bd	776	939
IPR002545	CheW-lke_dom	1812	1934
IPR002545	CheW-lke_dom	1647	1782
IPR002545	CheW-lke_dom	2090	2225
IPR003660	HAMP_dom	2661	2714
IPR010298	DUF901	963	1076
IPR008207	Sig_transdc_His_kin_Hpt_dom	1203	1297
IPR003594	HATPase_C	1501	1640
IPR001789	Sig_transdc_resp-reg_receiver	1960	2072
IPR001789	Sig_transdc_resp-reg_receiver	3020	3126
IPR004105	CheA-like_dim	1396	1452
IPR032688	ABC2_membrane_2	331	538
IPR032688	ABC2_membrane_2	65	189
IPR004089	MCPsignal_dom	2800	2971
IPR032875	Succ_CoA_lig_flav_dom	3744	3881
IPR000182	GNAT_dom	4352	4465

External Links

No external refs found!

SymbC1.scaffold32.89 (32.89)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation