SymbC1.scaffold32.119 (32.119)

Aliases : 32.119

Description : General secretion pathway protein K; Type II secretion system protein GspG, C-terminal; Type II secretion system protein GspE, N-terminal; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; Type II/IV secretion system protein; Type II secretion system protein GspF domain [Interproscan].

Gene families : OG_01_0000353 (OrthoFinder) Phylogenetic Tree(s): OG0000353_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold32.119
Cluster	HCCA: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold1.1726	1.1726	General secretion pathway protein K [Interproscan].	0.01	OrthoFinder
SymbC1.scaffold2.422	2.422	Pterin 4 alpha carbinolamine dehydratase; Type II...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009306	protein secretion	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0035592	establishment of protein localization to extracellular region	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071692	protein localization to extracellular region	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
BP	GO:0140352	export from cell	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003661	HisK_dim/P	3513	3579
IPR003594	HATPase_C	3626	3737
IPR013545	T2SS_protein-GspG_C	1255	1336
IPR018076	T2SS_GspF_dom	876	999
IPR018076	T2SS_GspF_dom	1082	1191
IPR007831	T2SS_GspE_N	269	368
IPR001789	Sig_transdc_resp-reg_receiver	3351	3460
IPR001789	Sig_transdc_resp-reg_receiver	3854	3963
IPR001789	Sig_transdc_resp-reg_receiver	3236	3347
IPR001482	T2SS/T4SS	415	683
IPR005628	GspK	1927	2104

External Links

No external refs found!

SymbC1.scaffold32.119 (32.119)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation