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  5. SymbC1.scaffold32.109

SymbC1.scaffold32.109 (32.109)


Aliases : 32.109

Description : Domain of unknown function DUF1080; Oxidoreductase, N-terminal [Interproscan].


Gene families : OG_01_0006545 (OrthoFinder) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold32.109
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold16.127 16.127 DoxX family; Oxidoreductase, N-terminal [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2.1592 2.1592 Oxidoreductase, N-terminal [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2.1982 2.1982 Oxidoreductase, N-terminal [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000683 Gfo/Idh/MocA-like_OxRdtase_N 51 162
IPR010496 3-keto-disaccharide_hydrolase 472 673
No external refs found!