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  5. SymbC1.scaffold3196.1

SymbC1.scaffold3196.1 (3196.1)


Aliases : 3196.1

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000622 (OrthoFinder) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3196.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1247.6 1247.6 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3702.3 3702.3 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 104 351
No external refs found!