SymbC1.scaffold3067.2 (3067.2)

Aliases : 3067.2

Description : Ammonium transporter AmtB-like domain [Interproscan].

Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold3067.2
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
EOD32919 No alias Ammonium transporter [Ensembl]. 0.06 OrthoFinder
Sro1521_g279450.1 Contig1605.g14549 Ammonium transporter 1 member 0.04 OrthoFinder
SymbC1.scaffold3283.3 3283.3 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3285.4 3285.4 Ammonium transporter AmtB-like domain [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold564.4 564.4 Ammonium transporter AmtB-like domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold7899.1 7899.1 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
Vocar.0069s0013.1 32896755 Ammonium transporter AmtB-like domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59700.1_6212 PRW59700 Ammonium transporter 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 241 293
IPR024041 NH4_transpt_AmtB-like_dom 76 233
IPR024041 NH4_transpt_AmtB-like_dom 302 508
No external refs found!