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  5. SymbC1.scaffold2968.2

SymbC1.scaffold2968.2 (2968.2)


Aliases : 2968.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2968.2
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.58 tig00000711_g3420.t1 Potassium channel KOR1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cpa|evm.model.tig00000851.5 tig00000851_g4889.t1 Putative cyclic nucleotide-gated ion channel 8... 0.02 OrthoFinder
Dusal.0081s00037.1 33198253 Ion transport domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1695.3 1695.3 Potassium channel domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1785.1 1785.1 Cyclic nucleotide-binding domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3638.5 3638.5 Potassium channel domain; Cyclic nucleotide-binding... 0.03 OrthoFinder
TP18G01660.1 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499949.1_8902 KAA8499949 Potassium voltage-gated channel subfamily H member 7 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004531 deoxyribonuclease II activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 26 248
No external refs found!