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  5. SymbC1.scaffold2693.4

SymbC1.scaffold2693.4 (2693.4)


Aliases : 2693.4

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000305 (OrthoFinder) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2693.4
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold10192.1 10192.1 EF-hand domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1821.3 1821.3 EF-hand domain; Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold2758.5 2758.5 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold3286.1 3286.1 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold702.8 702.8 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold815.1 815.1 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 179 268
No external refs found!