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  5. SymbC1.scaffold2580.2

SymbC1.scaffold2580.2 (2580.2)


Aliases : 2580.2

Description : C-5 cytosine methyltransferase; haloacid dehalogenase-like hydrolase [Interproscan].


Gene families : OG_01_0000252 (OrthoFinder) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2580.2
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold11488.1 11488.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold16042.1 16042.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold1770.1 1770.1 C-5 cytosine methyltransferase [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2033.1 2033.1 C-5 cytosine methyltransferase [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2476.5 2476.5 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold3355.1 3355.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold6587.2 6587.2 C-5 cytosine methyltransferase [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold8368.1 8368.1 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 2068 2197
No external refs found!