SymbC1.scaffold251.5 (251.5)


Aliases : 251.5

Description : Threonyl/alanyl tRNA synthetase, SAD; DHHA1 domain; Alanyl-tRNA synthetase, class IIc, N-terminal [Interproscan].


Gene families : OG_01_0000762 (OrthoFinder) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold251.5
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
EOD34337 No alias Alanyl-tRNA synthetase [Ensembl]. 0.05 OrthoFinder
OT_04G04780.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Glutathione... 0.02 OrthoFinder
Vocar.0020s0078.1 32886644 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.02 OrthoFinder
lcl|BLLF01003425.1_cds_GFH27296.1_21773 HaLaN_25594, GFH27296 Alanyl-tRNA synthetase 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494101.1_3965 KAA8494101 Alanine--tRNA ligase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004813 alanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006419 alanyl-tRNA aminoacylation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 1694 1752
IPR003156 DHHA1_dom 1809 1951
IPR018164 Ala-tRNA-synth_IIc_N 1441 1593
IPR018164 Ala-tRNA-synth_IIc_N 222 662
No external refs found!