Aliases : 25.150
Description : ABC transporter-like; Signal transduction response regulator, receiver domain; OmpR/PhoB-type DNA-binding domain; PhoU domain; Phosphotyrosine protein phosphatase I [Interproscan].
Gene families : OG_01_0004635 (OrthoFinder) Phylogenetic Tree(s): OG0004635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SymbC1.scaffold25.150 | |
Cluster | HCCA: Cluster_3 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0016887 | ATPase | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006265 | DNA topological change | IEP | Enrichment |
BP | GO:0006298 | mismatch repair | IEP | Enrichment |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
BP | GO:0006664 | glycolipid metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0006996 | organelle organization | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | Enrichment |
BP | GO:0009245 | lipid A biosynthetic process | IEP | Enrichment |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Enrichment |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0019213 | deacetylase activity | IEP | Enrichment |
MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Enrichment |
BP | GO:0046493 | lipid A metabolic process | IEP | Enrichment |
MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
BP | GO:0051276 | chromosome organization | IEP | Enrichment |
BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Enrichment |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Enrichment |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 11 | 124 |
IPR001789 | Sig_transdc_resp-reg_receiver | 794 | 901 |
IPR026022 | PhoU_dom | 204 | 292 |
IPR026022 | PhoU_dom | 307 | 392 |
IPR026022 | PhoU_dom | 692 | 777 |
IPR026022 | PhoU_dom | 589 | 676 |
IPR001867 | OmpR/PhoB-type_DNA-bd | 936 | 1009 |
IPR023485 | Ptyr_pPase | 415 | 548 |
No external refs found! |