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  5. Cpa|evm.model.tig00020554.164

Cpa|evm.model.tig00020554.164 (tig00020554_g10943.t1)


Aliases : tig00020554_g10943.t1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.164
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0026s0119.1 32892596 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01000553.1_cds_GFH12907.1_7384 HaLaN_08686, GFH12907 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491694.1_5162 KAA8491694 Multidrug resistance-associated protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 230 356
IPR011527 ABC1_TM_dom 752 988
IPR003439 ABC_transporter-like_ATP-bd 1105 1228
IPR003439 ABC_transporter-like_ATP-bd 485 619
No external refs found!