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  5. SymbC1.scaffold2307.30

SymbC1.scaffold2307.30 (2307.30)


Aliases : 2307.30

Description : Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; Helicase, C-terminal; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain [Interproscan].


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2307.30
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.01 OrthoFinder
Sro25_g017380.1 Contig1417.g13077 Virulence factors putative positive transcription regulator BvgA 0.02 OrthoFinder
SymbC1.scaffold109.65 109.65 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.02 OrthoFinder
SymbC1.scaffold22.9 22.9 PAS fold; Signal transduction histidine kinase,... 0.02 OrthoFinder
SymbC1.scaffold4.1248 4.1248 HAMP domain; Signal transduction histidine kinase,... 0.04 OrthoFinder
XM_003060856.1 MicpuC2_20059, 20059 Signal transduction response regulator, receiver domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004016 adenylate cyclase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008294 calcium- and calmodulin-responsive adenylate cyclase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 712 812
IPR001789 Sig_transdc_resp-reg_receiver 406 520
IPR003661 HisK_dim/P 144 209
IPR003594 HATPase_C 256 369
No external refs found!