SymbC1.scaffold2231.1 (2231.1)

Aliases : 2231.1

Description : C-5 cytosine methyltransferase; Ribonuclease H domain; DNA recombination and repair protein Rad51-like, C-terminal; Reverse transcriptase domain [Interproscan].

Gene families : OG_01_0000169 (OrthoFinder) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2231.1
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold1613.2	1613.2	C-5 cytosine methyltransferase; Reverse transcriptase...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008430	selenium binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013632	DNA_recomb/repair_Rad51_C	3385	3603
IPR000477	RT_dom	2413	2616
IPR001525	C5_MeTfrase	107	273
IPR002156	RNaseH_domain	2970	3126

External Links

No external refs found!

SymbC1.scaffold2231.1 (2231.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation