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  5. SymbC1.scaffold2230.4

SymbC1.scaffold2230.4 (2230.4)


Aliases : 2230.4

Description : Major intrinsic protein [Interproscan].


Gene families : OG_01_0000557 (OrthoFinder) Phylogenetic Tree(s): OG0000557_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2230.4
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cz09g23310.t1 No alias Major intrinsic protein [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56449.1_9504 PRW56449 Aquaporin 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR000425 MIP 376 439
IPR000425 MIP 229 403
IPR000425 MIP 5 214
IPR000425 MIP 149 247
No external refs found!