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  5. SymbC1.scaffold22.116

SymbC1.scaffold22.116 (22.116)


Aliases : 22.116

Description : Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Methylmalonyl Co-A mutase-associated GTPase MeaB; Alpha/beta hydrolase fold-1; Thiolase, C-terminal; Cobalamin (vitamin B12)-binding domain; Thiolase, N-terminal; Short-chain dehydrogenase/reductase SDR; Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Aminoglycoside phosphotransferase [Interproscan].


Gene families : OG_01_0003578 (OrthoFinder) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold22.116
Cluster HCCA: Cluster_3


Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
MF GO:0016866 intramolecular transferase activity IEA Interproscan
MF GO:0031419 cobalamin binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 463 533
IPR020617 Thiolase_C 323 437
IPR020616 Thiolase_N 57 314
IPR000073 AB_hydrolase_1 730 974
IPR006158 Cobalamin-bd 2916 3027
IPR006099 MeMalonylCoA_mutase_a/b_cat 1691 2248
IPR006099 MeMalonylCoA_mutase_a/b_cat 2362 2873
IPR002575 Aminoglycoside_PTrfase 1281 1366
No external refs found!