SymbC1.scaffold22.105 (22.105)

Aliases : 22.105

Description : Biotin/lipoyl attachment; Acetyl-CoA carboxylase; Sodium ion-translocating decarboxylase; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PHA accumulation regulator DNA-binding, N-terminal; Short-chain dehydrogenase/reductase SDR [Interproscan].

Gene families : OG_01_0000806 (OrthoFinder) Phylogenetic Tree(s): OG0000806_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold22.105
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold19985.1	19985.1	Acyclic terpene utilisation; Acetyl-CoA carboxylase...	0.03	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW59753.1_6438	PRW59753	Propionyl-carboxylase beta mitochondrial	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006814	sodium ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008948	oxaloacetate decarboxylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015081	sodium ion transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016829	lyase activity	IEA	Interproscan
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035725	sodium ion transmembrane transport	None	Extended
BP	GO:0036376	sodium ion export across plasma membrane	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0070839	metal ion export	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140115	export across plasma membrane	None	Extended
BP	GO:0140352	export from cell	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001539	cilium or flagellum-dependent cell motility	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003796	lysozyme activity	IEP	Enrichment
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	Enrichment
MF	GO:0004017	adenylate kinase activity	IEP	Enrichment
MF	GO:0004565	beta-galactosidase activity	IEP	Enrichment
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Enrichment
CC	GO:0005576	extracellular region	IEP	Enrichment
CC	GO:0005886	plasma membrane	IEP	Enrichment
BP	GO:0006026	aminoglycan catabolic process	IEP	Enrichment
BP	GO:0006027	glycosaminoglycan catabolic process	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006275	regulation of DNA replication	IEP	Enrichment
BP	GO:0006766	vitamin metabolic process	IEP	Enrichment
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Enrichment
BP	GO:0006879	cellular iron ion homeostasis	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Enrichment
BP	GO:0009110	vitamin biosynthetic process	IEP	Enrichment
BP	GO:0009253	peptidoglycan catabolic process	IEP	Enrichment
CC	GO:0009341	beta-galactosidase complex	IEP	Enrichment
CC	GO:0009360	DNA polymerase III complex	IEP	Enrichment
CC	GO:0009425	bacterial-type flagellum basal body	IEP	Enrichment
CC	GO:0009427	bacterial-type flagellum basal body, distal rod, L ring	IEP	Enrichment
CC	GO:0009428	bacterial-type flagellum basal body, distal rod, P ring	IEP	Enrichment
BP	GO:0009889	regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Enrichment
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Enrichment
MF	GO:0015288	porin activity	IEP	Enrichment
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015297	antiporter activity	IEP	Enrichment
MF	GO:0015491	cation:cation antiporter activity	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
MF	GO:0015925	galactosidase activity	IEP	Enrichment
BP	GO:0015939	pantothenate metabolic process	IEP	Enrichment
BP	GO:0015940	pantothenate biosynthetic process	IEP	Enrichment
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
BP	GO:0019222	regulation of metabolic process	IEP	Enrichment
MF	GO:0022829	wide pore channel activity	IEP	Enrichment
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Enrichment
BP	GO:0031323	regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Enrichment
MF	GO:0032182	ubiquitin-like protein binding	IEP	Enrichment
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Enrichment
CC	GO:0042575	DNA polymerase complex	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
MF	GO:0043130	ubiquitin binding	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0043772	acyl-phosphate glycerol-3-phosphate acyltransferase activity	IEP	Enrichment
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Enrichment
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0048870	cell motility	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
MF	GO:0050380	undecaprenyl-diphosphatase activity	IEP	Enrichment
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Enrichment
BP	GO:0051775	response to redox state	IEP	Enrichment
BP	GO:0055072	iron ion homeostasis	IEP	Enrichment
MF	GO:0060090	molecular adaptor activity	IEP	Enrichment
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0061783	peptidoglycan muralytic activity	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071973	bacterial-type flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Enrichment
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Enrichment
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005661	OadB_MmdB	1221	1576
IPR012909	PHA_DNA-bd_N	288	344
IPR002347	SDR_fam	7	223
IPR005899	Na_pump_deCOase	1039	1109
IPR034733	AcCoA_carboxyl	553	1013
IPR000089	Biotin_lipoyl	1155	1198

External Links

No external refs found!

SymbC1.scaffold22.105 (22.105)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation