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  5. SymbC1.scaffold2191.3

SymbC1.scaffold2191.3 (2191.3)


Aliases : 2191.3

Description : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain [Interproscan].


Gene families : OG_01_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2191.3
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.47 tig00000402_g224.t1 Protein modification.protein folding and quality... 0.01 OrthoFinder
Cre10.g417500 30790567 Protein modification.protein folding and quality... 0.02 OrthoFinder
Sro146_g067660.1 Contig2363.g19456 Cis-trans isomerase 0.02 OrthoFinder
Sro245_g097450.1 Contig3087.g24616 Cis-trans isomerase 0.01 OrthoFinder
XM_003058339.1 MicpuC2_17355, 17355 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
lcl|BLLF01005104.1_cds_GFH30734.1_25211 HaLaN_29641, GFH30734 Peptidyl-prolyl cis-trans isomerase 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 101 250
No external refs found!