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  5. SymbC1.scaffold2188.7

SymbC1.scaffold2188.7 (2188.7)


Aliases : 2188.7

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2188.7
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1240.1 1240.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1779.3 1779.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold18530.1 18530.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold5395.1 5395.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold704.3 704.3 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7358.1 7358.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold7358.2 7358.2 EF-hand domain pair; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold8446.2 8446.2 Ion transport domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 231 476
No external refs found!