Cpa|evm.model.tig00020553.191 (tig00020553_g10681.t1)

Aliases : tig00020553_g10681.t1

Description : ABC transporter C family member 11 OS=Arabidopsis thaliana

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020553.191
Cluster	HCCA: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g103250	30785465, MRP5	Solute transport.primary active transport.ABC...	0.03	OrthoFinder
Cre07.g325761	30775279	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre13.g564900	30784450, MRP3	Solute transport.primary active transport.ABC...	0.05	OrthoFinder
Cre17.g734612	30781956, MRP2	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cz03g28180.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Cz05g17060.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.07	OrthoFinder
Dusal.0432s00003.1	33197469	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
EOD08599	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.04	OrthoFinder
EOD26066	No alias	EF-hand domain; ABC transporter type 1, transmembrane...	0.03	OrthoFinder
EOD33714	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.06	OrthoFinder
EOD37777	No alias	Multidrug resistance-associated protein, ABC superfamily...	0.02	OrthoFinder
OT_07G01620.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
PTI_03G04630.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.03	OrthoFinder
PTI_03G06590.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.03	OrthoFinder
Sro1322_g262550.1	Contig3764.g28905	Multiple drug resistance-associated protein-like transporter 1	0.04	OrthoFinder
Sro1659_g289200.1	Contig194.g2262	Oligomycin resistance ATP-dependent permease YOR1	0.01	OrthoFinder
Sro183_g079600.1	Contig3056.g24305	Multiple drug resistance-associated protein-like transporter 1	0.04	OrthoFinder
Sro399_g134960.1	Contig279.g3623	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
Sro983_g227840.1	Contig79.g823	Multiple drug resistance-associated protein-like transporter 1	0.01	OrthoFinder
TP04G07990.1	No alias	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
TP07G05800.1	No alias	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
Transcript_contig_55599	55599	ABC transporter type 1, transmembrane domain [Interproscan].	0.02	OrthoFinder
Transcript_contig_56405	56405	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Vocar.0012s0088.1	32894879	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
Vocar.0028s0030.1	32895600	ABC transporter-like; ABC transporter type 1,...	0.03	OrthoFinder
XM_002508173.1	MICPUN_94915, 94915	ATP-binding cassette superfamily	0.05	OrthoFinder
lcl\|BLLF01003175.1_cds_GFH26596.1_21073	HaLaN_24770, GFH26596	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
lcl\|LHPG02000009.1_cds_PRW56046.1_9960	PRW56046	Multidrug resistance-associated 1 isoform X1	0.03	OrthoFinder
lcl\|LHPG02000015.1_cds_PRW33949.1_2946	PRW33949	ABC transporter isoform A	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499894.1_8847	KAA8499894	Multidrug resistance-associated protein 1	0.02	OrthoFinder
lcl\|VRMN01000012.1_cds_KAA8491694.1_5162	KAA8491694	Multidrug resistance-associated protein 1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004788	thiamine diphosphokinase activity	IEP	Enrichment
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015297	antiporter activity	IEP	Enrichment
MF	GO:0015298	solute:cation antiporter activity	IEP	Enrichment
MF	GO:0015299	solute:proton antiporter activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0016778	diphosphotransferase activity	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	103	371

External Links

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Cpa|evm.model.tig00020553.191 (tig00020553_g10681.t1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation