SymbC1.scaffold21.298 (21.298)


Aliases : 21.298

Description : Citrate synthase; Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain [Interproscan].


Gene families : OG_01_0001552 (OrthoFinder) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold21.298
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2.1362 2.1362 Protein kinase domain; EAL domain; Tubulin-like;... 0.04 OrthoFinder
Transcript_contig_54552 54552 Citrate synthase [Interproscan]. 0.02 OrthoFinder
Vocar.0014s0142.1 32888562 Citrate synthase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR020058 Glu/Gln-tRNA-synth_Ib_cat-dom 11 310
IPR002020 Citrate_synthase 459 783
No external refs found!