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  5. SymbC1.scaffold2070.3

SymbC1.scaffold2070.3 (2070.3)


Aliases : 2070.3

Description : Multi antimicrobial extrusion protein [Interproscan].


Gene families : OG_01_0000073 (OrthoFinder) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2070.3
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cre04.g213000 30791387 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder
Cz17g13040.t1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
EOD29697 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder
TP01G02090.1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
XM_003057120.1 MicpuC2_38595, 38595 Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase... 0.02 OrthoFinder
XM_003057278.1 MicpuC2_56378, 56378 Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase... 0.02 OrthoFinder
lcl|BLLF01002227.1_cds_GFH23247.1_17724 HaLaN_20836, GFH23247 Multidrug and toxic compound extrusion protein 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44868.1_1694 PRW44868 MATE efflux family 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 23 133
IPR002528 MATE_fam 195 351
No external refs found!