SymbC1.scaffold203.6 (203.6)

Aliases : 203.6

Description : C-5 cytosine methyltransferase [Interproscan].

Gene families : OG_01_0000252 (OrthoFinder) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold203.6
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold11850.1	11850.1	C-5 cytosine methyltransferase [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold1907.8	1907.8	C-5 cytosine methyltransferase [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold5411.1	5411.1	Hypothetical protein	0.05	OrthoFinder
SymbC1.scaffold545.1	545.1	C-5 cytosine methyltransferase [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold5486.1	5486.1	Hypothetical protein	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
MF	GO:0009982	pseudouridine synthase activity	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001525	C5_MeTfrase	496	633

External Links

No external refs found!