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  5. SymbC1.scaffold2021.5

SymbC1.scaffold2021.5 (2021.5)


Aliases : 2021.5

Description : Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan].


Gene families : OG_01_0000480 (OrthoFinder) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2021.5
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4302.1 4302.1 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold4302.2 4302.2 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 153 248
No external refs found!