SymbC1.scaffold2.1731 (2.1731)

Aliases : 2.1731

Description : Mur ligase, N-terminal catalytic domain; Mur ligase, central; Glycosyl transferase, family 28, C-terminal; Carbohydrate kinase, FGGY, C-terminal; Mur ligase, C-terminal; Glycosyl transferase, family 4; Glycosyltransferase family 28, N-terminal domain; Carbohydrate kinase, FGGY, N-terminal [Interproscan].

Gene families : OG_01_0003485 (OrthoFinder) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2.1731
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g519900	30791765	RNA biosynthesis.organelle machineries.RNA polymerase...	0.01	OrthoFinder
Vocar.0037s0137.1	32897634	Mur ligase, C-terminal; Mur ligase, central [Interproscan].	0.01	OrthoFinder
XM_003059649.1	MicpuC2_18633, 18633	Mur ligase, N-terminal catalytic domain; Mur ligase,...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	IEA	Interproscan
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEA	Interproscan
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	None	Extended
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0030259	lipid glycosylation	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEP	Enrichment
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006544	glycine metabolic process	IEP	Enrichment
BP	GO:0006546	glycine catabolic process	IEP	Enrichment
BP	GO:0009063	cellular amino acid catabolic process	IEP	Enrichment
BP	GO:0009069	serine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009071	serine family amino acid catabolic process	IEP	Enrichment
BP	GO:0015858	nucleoside transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
BP	GO:0016054	organic acid catabolic process	IEP	Enrichment
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Enrichment
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0030551	cyclic nucleotide binding	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0035438	cyclic-di-GMP binding	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
BP	GO:0046395	carboxylic acid catabolic process	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Enrichment
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004276	GlycoTrans_28_N	2118	2252
IPR004101	Mur_ligase_C	1059	1143
IPR004101	Mur_ligase_C	1499	1560
IPR007235	Glyco_trans_28_C	2301	2456
IPR000715	Glycosyl_transferase_4	1784	1965
IPR018484	Carb_kinase_FGGY_N	4	248
IPR013221	Mur_ligase_cen	1294	1475
IPR013221	Mur_ligase_cen	840	1038
IPR018485	Carb_kinase_FGGY_C	258	453
IPR000713	Mur_ligase_N	759	823

External Links

No external refs found!

SymbC1.scaffold2.1731 (2.1731)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation