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  5. SymbC1.scaffold1976.2

SymbC1.scaffold1976.2 (1976.2)


Aliases : 1976.2

Description : Deoxynucleoside kinase domain [Interproscan].


Gene families : OG_01_0000355 (OrthoFinder) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1976.2
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Sro2986_g341670.1 Contig224.g2649 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold11270.1 11270.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold1503.2 1503.2 Tyrosine-protein kinase ephrin type A/B receptor-like... 0.08 OrthoFinder
SymbC1.scaffold2295.6 2295.6 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and... 0.03 OrthoFinder
SymbC1.scaffold2850.1 2850.1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and... 0.03 OrthoFinder
SymbC1.scaffold2963.5 2963.5 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold401.5 401.5 Laminin EGF domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold5055.1 5055.1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and... 0.01 OrthoFinder
SymbC1.scaffold6697.1 6697.1 Tyrosine-protein kinase ephrin type A/B receptor-like;... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004531 deoxyribonuclease II activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR031314 DNK_dom 287 454
No external refs found!