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  5. SymbC1.scaffold1948.6

SymbC1.scaffold1948.6 (1948.6)


Aliases : 1948.6

Description : Leucine-rich repeat; Eukaryotic translation initiation factor 3 subunit D [Interproscan].


Gene families : OG_01_0002721 (OrthoFinder) Phylogenetic Tree(s): OG0002721_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1948.6
Cluster HCCA: Cluster_97


Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
CC GO:0031360 intrinsic component of thylakoid membrane IEP Enrichment
CC GO:0031361 integral component of thylakoid membrane IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 1124 1143
IPR001611 Leu-rich_rpt 1067 1088
IPR001611 Leu-rich_rpt 1013 1033
IPR001611 Leu-rich_rpt 1041 1061
IPR007783 eIF3d 5 526
No external refs found!