SymbC1.scaffold1907.6 (1907.6)

Aliases : 1907.6

Description : IBR domain; Pyridoxal 5'-phosphate synthase subunit PdxT/SNO; Zinc finger, C3HC4 RING-type; Kinesin motor domain [Interproscan].

Gene families : OG_01_0003310 (OrthoFinder) Phylogenetic Tree(s): OG0003310_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1907.6
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cz01g22050.t1	No alias	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO [Interproscan].	0.02	OrthoFinder
Sro76_g041640.1	Contig184.g2142	5'-phosphate synthase subunit PdxT	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004359	glutaminase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
MF	GO:0008017	microtubule binding	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042816	vitamin B6 metabolic process	None	Extended
BP	GO:0042819	vitamin B6 biosynthetic process	IEA	Interproscan
BP	GO:0042822	pyridoxal phosphate metabolic process	None	Extended
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046184	aldehyde biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
BP	GO:0072525	pyridine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Enrichment
MF	GO:0004340	glucokinase activity	IEP	Enrichment
MF	GO:0004396	hexokinase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
MF	GO:0005536	glucose binding	IEP	Enrichment
CC	GO:0005787	signal peptidase complex	IEP	Enrichment
BP	GO:0006073	cellular glucan metabolic process	IEP	Enrichment
BP	GO:0006465	signal peptide processing	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
BP	GO:0009251	glucan catabolic process	IEP	Enrichment
BP	GO:0016052	carbohydrate catabolic process	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0019200	carbohydrate kinase activity	IEP	Enrichment
BP	GO:0030243	cellulose metabolic process	IEP	Enrichment
BP	GO:0030245	cellulose catabolic process	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
BP	GO:0044042	glucan metabolic process	IEP	Enrichment
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Enrichment
BP	GO:0051273	beta-glucan metabolic process	IEP	Enrichment
BP	GO:0051275	beta-glucan catabolic process	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Enrichment
BP	GO:1901575	organic substance catabolic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002867	IBR_dom	553	596
IPR018957	Znf_C3HC4_RING-type	464	502
IPR001752	Kinesin_motor_dom	20	226
IPR002161	PdxT/SNO	234	378

External Links

No external refs found!

SymbC1.scaffold1907.6 (1907.6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation