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  5. SymbC1.scaffold19.207

SymbC1.scaffold19.207 (19.207)


Aliases : 19.207

Description : CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; Methyltransferase type 11; ATP-citrate lyase/succinyl-CoA ligase; Thioesterase domain; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Cupin 2, conserved barrel; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal [Interproscan].


Gene families : OG_01_0000744 (OrthoFinder) Phylogenetic Tree(s): OG0000744_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold19.207
Cluster HCCA: Cluster_10


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006805 xenobiotic metabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0010124 phenylacetate catabolic process IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032182 ubiquitin-like protein binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042178 xenobiotic catabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042537 benzene-containing compound metabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0043130 ubiquitin binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003781 CoA-bd 838 916
IPR031717 KGD_C 1868 2022
IPR001017 DH_E1 1283 1598
IPR013216 Methyltransf_11 588 681
IPR005475 Transketolase-like_Pyr-bd 1669 1864
IPR006683 Thioestr_dom 422 500
IPR013096 Cupin_2 752 807
IPR005811 CoA_ligase 272 391
IPR005811 CoA_ligase 949 1059
IPR013650 ATP-grasp_succ-CoA_synth-type 2 212
No external refs found!