SymbC1.scaffold19.166 (19.166)

Aliases : 19.166

Description : S1 domain; Cytidylate kinase domain [Interproscan].

Gene families : OG_01_0000672 (OrthoFinder) Phylogenetic Tree(s): OG0000672_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold19.166
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold2.903	2.903	Xylose isomerase-like, TIM barrel domain; S1 domain...	0.04	OrthoFinder
SymbC1.scaffold40359.1	40359.1	S1 domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004127	cytidylate kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019205	nucleobase-containing compound kinase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050145	nucleoside monophosphate kinase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003029	S1_domain	239	306
IPR003029	S1_domain	500	568
IPR003029	S1_domain	410	481
IPR003029	S1_domain	322	391
IPR003029	S1_domain	668	742
IPR003029	S1_domain	581	655
IPR011994	Cytidylate_kinase_dom	12	108
IPR011994	Cytidylate_kinase_dom	109	167

External Links

No external refs found!

SymbC1.scaffold19.166 (19.166)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation