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  5. SymbC1.scaffold1819.3

SymbC1.scaffold1819.3 (1819.3)


Aliases : 1819.3

Description : PPPDE putative peptidase domain; EF-hand domain [Interproscan].


Gene families : OG_01_0002533 (OrthoFinder) Phylogenetic Tree(s): OG0002533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1819.3
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold339.6 339.6 PUB domain; PPPDE putative peptidase domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 220 369
IPR002048 EF_hand_dom 83 106
IPR002048 EF_hand_dom 135 212
No external refs found!