SymbC1.scaffold1753.4 (1753.4)

Aliases : 1753.4

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].

Gene families : OG_01_0000221 (OrthoFinder) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1753.4
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method	Actions
Transcript_contig_57585	57585	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Enrichment
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Enrichment
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Enrichment
MF	GO:0003956	NAD(P)+-protein-arginine ADP-ribosyltransferase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Enrichment
MF	GO:0004594	pantothenate kinase activity	IEP	Enrichment
MF	GO:0004659	prenyltransferase activity	IEP	Enrichment
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
BP	GO:0006073	cellular glucan metabolic process	IEP	Enrichment
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Enrichment
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006471	protein ADP-ribosylation	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
MF	GO:0008318	protein prenyltransferase activity	IEP	Enrichment
BP	GO:0009250	glucan biosynthetic process	IEP	Enrichment
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Enrichment
BP	GO:0015936	coenzyme A metabolic process	IEP	Enrichment
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Enrichment
BP	GO:0018342	protein prenylation	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Enrichment
CC	GO:0034464	BBSome	IEP	Enrichment
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
BP	GO:0044042	glucan metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0044782	cilium organization	IEP	Enrichment
MF	GO:0046527	glucosyltransferase activity	IEP	Enrichment
BP	GO:0051273	beta-glucan metabolic process	IEP	Enrichment
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Enrichment
BP	GO:0060271	cilium assembly	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Enrichment
BP	GO:0097354	prenylation	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Enrichment
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	68	337
IPR003439	ABC_transporter-like_ATP-bd	443	600

External Links

No external refs found!

SymbC1.scaffold1753.4 (1753.4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation