SymbC1.scaffold168.1 (168.1)

Aliases : 168.1

Description : Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Ion transport domain [Interproscan].

Gene families : OG_01_0000155 (OrthoFinder) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold168.1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000157.36	tig00000157_g9626.t1	Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate...	0.02	OrthoFinder
Cre01.g010900	30788366, GAP3	Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate...	0.03	OrthoFinder
EOD12107	No alias	Glyceraldehyde 3-phosphate dehydrogenase [Ensembl].	0.01	OrthoFinder
Sro1099_g241080.1	Contig806.g8996	Glyceraldehyde-3-phosphate dehydrogenase (Fragment)	0.02	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20420.1_5624	PRW20420	Glyceraldehyde-3-phosphate dehydrogenase	0.02	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495266.1_1264	KAA8495266	Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEA	Interproscan
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004055	argininosuccinate synthase activity	IEP	Enrichment
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Enrichment
BP	GO:0006525	arginine metabolic process	IEP	Enrichment
BP	GO:0006526	arginine biosynthetic process	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020829	GlycerAld_3-P_DH_cat	704	783
IPR020828	GlycerAld_3-P_DH_NAD(P)-bd	568	649
IPR005821	Ion_trans_dom	2	262

External Links

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SymbC1.scaffold168.1 (168.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation