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Aliases : 16.150
Description : Domain of unknown function DUF1588; Domain of unknown function DUF1587; Domain of unknown function DUF1592; Domain of unknown function DUF1595; Protein of unknown function DUF1552; Domain of unknown function DUF1585; Cytochrome C, Planctomycete-type [Interproscan].
Gene families : OG_01_0000537 (OrthoFinder) Phylogenetic Tree(s): OG0000537_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold16.150 | |
| Cluster | HCCA: Cluster_202 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold1.1147 | 1.1147 | Domain of unknown function DUF1588; Domain of unknown... | 0.03 | OrthoFinder | |
| SymbC1.scaffold1.1324 | 1.1324 | RNA polymerase sigma-70 region 2; Domain of unknown... | 0.03 | OrthoFinder | |
| SymbC1.scaffold1.2120 | 1.2120 | Domain of unknown function DUF1588; Ankyrin... | 0.03 | OrthoFinder | |
| SymbC1.scaffold1.613 | 1.613 | Domain of unknown function DUF1588; Phage late control... | 0.01 | OrthoFinder | |
| SymbC1.scaffold1.947 | 1.947 | Domain of unknown function DUF1588; Domain of unknown... | 0.04 | OrthoFinder | |
| SymbC1.scaffold16.276 | 16.276 | Domain of unknown function DUF1588; Domain of unknown... | 0.05 | OrthoFinder | |
| SymbC1.scaffold2.466 | 2.466 | Domain of unknown function DUF1588; Domain of unknown... | 0.05 | OrthoFinder | |
| SymbC1.scaffold2.867 | 2.867 | Domain of unknown function DUF1588; Carbohydrate binding... | 0.03 | OrthoFinder | |
| SymbC1.scaffold2.868 | 2.868 | GGDEF domain; Protein of unknown function DUF1552 [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold20793.1 | 20793.1 | Domain of unknown function DUF1588; Domain of unknown... | 0.04 | OrthoFinder | |
| SymbC1.scaffold23610.1 | 23610.1 | Domain of unknown function DUF1585; Domain of unknown... | 0.03 | OrthoFinder | |
| SymbC1.scaffold24882.1 | 24882.1 | Protein of unknown function DUF1552 [Interproscan]. | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Enrichment |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Enrichment |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Enrichment |
| MF | GO:0004451 | isocitrate lyase activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006012 | galactose metabolic process | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Enrichment |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Enrichment |
| BP | GO:0007155 | cell adhesion | IEP | Enrichment |
| BP | GO:0007160 | cell-matrix adhesion | IEP | Enrichment |
| MF | GO:0008108 | UDP-glucose:hexose-1-phosphate uridylyltransferase activity | IEP | Enrichment |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008484 | sulfuric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0008705 | methionine synthase activity | IEP | Enrichment |
| MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Enrichment |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Enrichment |
| MF | GO:0008984 | protein-glutamate methylesterase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015159 | polysaccharide transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015774 | polysaccharide transport | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0022610 | biological adhesion | IEP | Enrichment |
| CC | GO:0030312 | external encapsulating structure | IEP | Enrichment |
| CC | GO:0031012 | extracellular matrix | IEP | Enrichment |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Enrichment |
| MF | GO:0031419 | cobalamin binding | IEP | Enrichment |
| BP | GO:0031589 | cell-substrate adhesion | IEP | Enrichment |
| BP | GO:0032324 | molybdopterin cofactor biosynthetic process | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
| MF | GO:0042084 | 5-methyltetrahydrofolate-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Enrichment |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| MF | GO:0047661 | amino-acid racemase activity | IEP | Enrichment |
| MF | GO:0048038 | quinone binding | IEP | Enrichment |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Enrichment |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0051301 | cell division | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| MF | GO:0051723 | protein methylesterase activity | IEP | Enrichment |
| BP | GO:0051775 | response to redox state | IEP | Enrichment |
| BP | GO:0055072 | iron ion homeostasis | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Enrichment |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:1901661 | quinone metabolic process | IEP | Enrichment |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Enrichment |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:1904949 | ATPase complex | IEP | Enrichment |
| CC | GO:1990351 | transporter complex | IEP | Enrichment |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| No external refs found! |